Domaines de compétence

Expérience professionnelle

03/2003 – present    EMBL (European Molecular Biology Laboratory), Heidelberg, Germany.

05/2005 – present    Software Engineer – Cell Biology and Biophysics Unit

Implemented and deployed systems to manage classified high throughput screening data including the following:

•    A flexible and efficient system used to store relevant information on screening experiments, based on an Oracle database backend.

•    Mid-tier API and Applications for automation of analysis of multiple screening projects allowing screening dataset comparison.
•    Implementation of a User Interface for screening data management and visualisation.
•    Development of a cluster management software application to perform automated analysis.
•    Configuration and deployment of a cluster of five machines for high performance screening data analysis (two terabytes dataset).
•    Development of plugins for ImageJ.
•    Collaboration with the MitoCheck Project Team.

Collaborated with several internal and external teams on the development of custom Image Processing solutions:
•    Provided EMBL scientists with specific functionality and technical assistance to enable novel data analysis and image processing.
•    Interfaced with external groups collaborating with EMBL on their Image Processing projects.
•    Collaborated with a microscopy company on a commercial Image Analysis software product for screening application: Scan^R Analysis, OBS, Munich (Germany).

08/2003 – 05/2005   Research Technician – Microcomputing and data acquisition

Developed various software applications for Image Processing and Analysis.
Studied and resolved imaging and acquisition problems.
Implemented algorithms for recognition and classification:

•    Drosophila male/female classification.
•    Frog egg classification.
 

03/2003 – 07/2003     Internship – Computer and Networking Group

Identified and solved network threats and security issues.
Deployed an intrusion detection system (IDS) with two sensors for external and internal traffic.
Implemented a User Interface for the IDS systems management.
Identified two cases of network attacks and took corresponding measures.

Etudes